STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_00128Unannotated protein. (1275 aa)    
Predicted Functional Partners:
GCA_001403595_00575
Unannotated protein.
  
 0.994
GCA_001403595_01510
Unannotated protein.
    
 0.994
GCA_001403595_02593
Unannotated protein.
 
 0.982
GCA_001403595_00055
Unannotated protein.
   
 0.981
GCA_001403595_02910
Unannotated protein.
 
 0.981
GCA_001403595_01509
Unannotated protein.
   
 0.951
GCA_001403595_00059
Unannotated protein.
   
 0.926
GCA_001403595_03138
Unannotated protein.
   
 0.888
GCA_001403595_00702
Unannotated protein.
    
 0.756
GCA_001403595_00807
Unannotated protein.
 
 
 0.750
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.