STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_00952Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_001403595_00953
Unannotated protein.
 
   0.860
GCA_001403595_01857
Unannotated protein.
  
   0.803
GCA_001403595_00871
Unannotated protein.
 
   0.794
GCA_001403595_03095
Unannotated protein.
 
   0.721
GCA_001403595_00206
Unannotated protein.
 
   0.713
GCA_001403595_02226
Unannotated protein.
 
   0.658
GCA_001403595_00082
Unannotated protein.
 
   0.634
GCA_001403595_02762
Unannotated protein.
  
   0.623
GCA_001403595_00951
Unannotated protein.
 
    0.590
GCA_001403595_01128
Unannotated protein.
  
  
 
0.587
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.