STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_01820Unannotated protein. (1000 aa)    
Predicted Functional Partners:
GCA_001403595_01819
Unannotated protein.
 
 
   0.961
GCA_001403595_03232
Unannotated protein.
 
 
   0.855
GCA_001403595_02299
Unannotated protein.
 
 
   0.844
GCA_001403595_03305
Unannotated protein.
 
 
   0.844
GCA_001403595_01490
Unannotated protein.
 
 
   0.843
GCA_001403595_02728
Unannotated protein.
 
 
   0.843
GCA_001403595_01450
Unannotated protein.
 
 
   0.842
GCA_001403595_01942
Unannotated protein.
  
 
   0.842
GCA_001403595_02835
Unannotated protein.
  
 
   0.842
GCA_001403595_03064
Unannotated protein.
  
 
   0.842
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.