STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_02509Unannotated protein. (224 aa)    
Predicted Functional Partners:
GCA_001403595_02620
Unannotated protein.
 
 0.948
GCA_001403595_02401
Unannotated protein.
 
   
 0.815
GCA_001403595_01097
Unannotated protein.
  
 
  0.799
GCA_001403595_02373
Unannotated protein.
  
   
 0.791
GCA_001403595_02377
Unannotated protein.
 
     0.775
GCA_001403595_02376
Unannotated protein.
 
     0.773
GCA_001403595_01790
Unannotated protein.
  
     0.769
GCA_001403595_01014
Unannotated protein.
  
  
  0.767
GCA_001403595_02375
Unannotated protein.
  
     0.766
GCA_001403595_02461
Unannotated protein.
  
     0.760
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.