STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_03163Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_001403595_03164
Unannotated protein.
      0.917
GCA_001403595_02380
Unannotated protein.
  
 
  0.603
GCA_001403595_00212
Unannotated protein.
    
  0.594
GCA_001403595_01358
Unannotated protein.
      0.568
GCA_001403595_02588
Unannotated protein.
    
  0.564
GCA_001403595_01922
Unannotated protein.
    
  0.543
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.