STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403595_03222Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_001403595_02060
Unannotated protein.
  
 
 0.720
GCA_001403595_02545
Unannotated protein.
  
  
 0.682
GCA_001403595_00278
Unannotated protein.
  
  
 0.655
GCA_001403595_02052
Unannotated protein.
    
 
 0.628
GCA_001403595_02711
Unannotated protein.
    
 
 0.628
GCA_001403595_03042
Unannotated protein.
  
  
 0.618
GCA_001403595_03043
Unannotated protein.
 
  
 0.608
GCA_001403595_03335
Unannotated protein.
     
 0.406
Your Current Organism:
Gabonia massiliensis
NCBI taxonomy Id: 1686296
Other names: DSM 100571, G. massiliensis, Porphyromonadaceae bacterium GM3, strain GM3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.