evm_003852 protein (Chilo suppressalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

evm_003852

Uncharacterized protein. (165 aa)

Predicted Functional Partners:

evm_003599

0.998

evm_006005

0.990

evm_004952

0.990

evm_012049

0.988

evm_001291

0.979

evm_012884

0.975

evm_012079

0.975

evm_012588

0.969

evm_003731

0.957

evm_010449

0.948

Your Current Organism:

Chilo suppressalis

NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
evm_001291	evm_003599	A0A437BUL7	A0A437BMU2	Uncharacterized protein.	Uncharacterized protein.	0.991
evm_001291	evm_003852	A0A437BUL7	A0A3S2LQ04	Uncharacterized protein.	Uncharacterized protein.	0.979
evm_001291	evm_006005	A0A437BUL7	A0A437BG93	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.992
evm_001291	evm_012049	A0A437BUL7	A0A3S2P6Z3	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.868
evm_001291	evm_012079	A0A437BUL7	A0A437AYN4	Uncharacterized protein.	Uncharacterized protein.	0.647
evm_001291	evm_012588	A0A437BUL7	A0A437AX81	Uncharacterized protein.	J domain-containing protein.	0.872
evm_001291	evm_012884	A0A437BUL7	A0A437AWB4	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.625
evm_003599	evm_001291	A0A437BMU2	A0A437BUL7	Uncharacterized protein.	Uncharacterized protein.	0.991
evm_003599	evm_003731	A0A437BMU2	A0A3S2TPG3	Uncharacterized protein.	DUF4706 domain-containing protein.	0.960
evm_003599	evm_003852	A0A437BMU2	A0A3S2LQ04	Uncharacterized protein.	Uncharacterized protein.	0.998
evm_003599	evm_004952	A0A437BMU2	A0A437BJH9	Uncharacterized protein.	Uncharacterized protein.	0.993
evm_003599	evm_006005	A0A437BMU2	A0A437BG93	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.997
evm_003599	evm_012049	A0A437BMU2	A0A3S2P6Z3	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.996
evm_003599	evm_012588	A0A437BMU2	A0A437AX81	Uncharacterized protein.	J domain-containing protein.	0.977
evm_003599	evm_012884	A0A437BMU2	A0A437AWB4	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.976
evm_003731	evm_003599	A0A3S2TPG3	A0A437BMU2	DUF4706 domain-containing protein.	Uncharacterized protein.	0.960
evm_003731	evm_003852	A0A3S2TPG3	A0A3S2LQ04	DUF4706 domain-containing protein.	Uncharacterized protein.	0.957
evm_003731	evm_006005	A0A3S2TPG3	A0A437BG93	DUF4706 domain-containing protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.537
evm_003731	evm_010449	A0A3S2TPG3	A0A3S2LEE0	DUF4706 domain-containing protein.	Uncharacterized protein.	0.951
evm_003731	evm_012079	A0A3S2TPG3	A0A437AYN4	DUF4706 domain-containing protein.	Uncharacterized protein.	0.984