STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_006978MamL-1 domain-containing protein. (724 aa)    
Predicted Functional Partners:
evm_007394
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.845
evm_008203
Ubiquitin-like domain-containing protein.
    
 0.788
evm_011794
Uncharacterized protein.
   
 0.716
evm_008044
Histone H2A; Belongs to the histone H2A family.
    
 0.710
evm_015030
Roc domain-containing protein.
   
 0.697
evm_009255
Uncharacterized protein.
   
 0.697
evm_013572
Uncharacterized protein.
   
 0.697
evm_009254
Uncharacterized protein.
   
 0.697
evm_013831
Uncharacterized protein.
   
  0.694
evm_014047
H15 domain-containing protein; Belongs to the histone H2A family.
    
 0.682
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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