STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_004380RRM domain-containing protein. (115 aa)    
Predicted Functional Partners:
evm_012282
Uncharacterized protein.
   
 0.659
evm_001935
Uncharacterized protein.
    
 0.645
evm_013170
Uncharacterized protein.
   
 
 0.623
evm_002545
Uncharacterized protein.
    
 
 0.560
evm_008498
CSD_1 domain-containing protein.
   
 
 0.530
evm_013613
Uncharacterized protein.
    
 0.502
evm_012415
Uncharacterized protein.
   
 0.493
evm_004480
CSP domain-containing protein.
   
 
 0.491
evm_005717
RRM domain-containing protein.
   
 0.489
evm_011108
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.485
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.