evm_006528 protein (Chilo suppressalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

evm_006528

Uncharacterized protein. (928 aa)

Predicted Functional Partners:

evm_001928

0.650

evm_004254

0.574

evm_010214

0.532

evm_014766

0.514

evm_012556

0.514

evm_004517

0.501

evm_014226

0.437

evm_000847

0.432

evm_007477

0.422

evm_007476

0.422

Your Current Organism:

Chilo suppressalis

NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
evm_000847	evm_006528	A0A3S2NRC3	A0A3S2NU89	Era-type G domain-containing protein.	Uncharacterized protein.	0.432
evm_000847	evm_014226	A0A3S2NRC3	A0A437ATR3	Era-type G domain-containing protein.	Uncharacterized protein.	0.987
evm_001928	evm_006528	A0A437BSA8	A0A3S2NU89	Uncharacterized protein.	Uncharacterized protein.	0.650
evm_004254	evm_006528	A0A3S2M4E5	A0A3S2NU89	Mitogen-activated protein kinase.	Uncharacterized protein.	0.574
evm_004517	evm_006528	A0A3S2TNB7	A0A3S2NU89	Mitogen-activated protein kinase.	Uncharacterized protein.	0.501
evm_006528	evm_000847	A0A3S2NU89	A0A3S2NRC3	Uncharacterized protein.	Era-type G domain-containing protein.	0.432
evm_006528	evm_001928	A0A3S2NU89	A0A437BSA8	Uncharacterized protein.	Uncharacterized protein.	0.650
evm_006528	evm_004254	A0A3S2NU89	A0A3S2M4E5	Uncharacterized protein.	Mitogen-activated protein kinase.	0.574
evm_006528	evm_004517	A0A3S2NU89	A0A3S2TNB7	Uncharacterized protein.	Mitogen-activated protein kinase.	0.501
evm_006528	evm_007476	A0A3S2NU89	A0A437BBT9	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.422
evm_006528	evm_007477	A0A3S2NU89	A0A437BBQ8	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.422
evm_006528	evm_010214	A0A3S2NU89	A0A437B4R8	Uncharacterized protein.	Uncharacterized protein.	0.532
evm_006528	evm_012556	A0A3S2NU89	A0A3S2P685	Uncharacterized protein.	Uncharacterized protein.	0.514
evm_006528	evm_014226	A0A3S2NU89	A0A437ATR3	Uncharacterized protein.	Uncharacterized protein.	0.437
evm_006528	evm_014766	A0A3S2NU89	A0A3S2NNP1	Uncharacterized protein.	Uncharacterized protein.	0.514
evm_007476	evm_006528	A0A437BBT9	A0A3S2NU89	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.422
evm_007476	evm_007477	A0A437BBT9	A0A437BBQ8	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.943
evm_007477	evm_006528	A0A437BBQ8	A0A3S2NU89	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.422
evm_007477	evm_007476	A0A437BBQ8	A0A437BBT9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.943
evm_010214	evm_006528	A0A437B4R8	A0A3S2NU89	Uncharacterized protein.	Uncharacterized protein.	0.532