STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_015523CULT domain-containing protein. (133 aa)    
Predicted Functional Partners:
evm_000173
CPSF_A domain-containing protein.
    
 
 0.954
evm_013064
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.768
evm_002642
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.766
evm_013506
RING-type domain-containing protein.
    
 
 0.606
evm_002748
RING-type domain-containing protein.
    
 
 0.606
evm_002383
Uncharacterized protein.
    
   0.601
evm_014260
Tr-type G domain-containing protein.
    
 
 0.531
evm_004058
Tr-type G domain-containing protein.
    
 
 0.531
evm_015340
GTP_EFTU_D2 domain-containing protein.
    
 
 0.531
evm_009837
PCI domain-containing protein.
    
 
 0.514
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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