STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_013355Longin domain-containing protein; Belongs to the synaptobrevin family. (1633 aa)    
Predicted Functional Partners:
evm_002051
Uncharacterized protein.
     
 0.964
evm_007896
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.924
evm_005121
Uncharacterized protein.
    
 0.924
evm_008215
V-SNARE domain-containing protein.
    
 0.923
evm_012928
Uncharacterized protein.
    
 0.919
evm_007393
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.919
evm_001844
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.891
evm_005146
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.853
evm_013044
Uncharacterized protein.
    
 0.804
evm_007867
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.803
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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