STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_011736c-SKI_SMAD_bind domain-containing protein. (568 aa)    
Predicted Functional Partners:
evm_001294
Ubiquitin-like domain-containing protein.
      
 0.531
evm_002005
Uncharacterized protein.
      
 0.531
evm_000942
Uncharacterized protein.
      
 0.530
evm_000102
Ubiquitin-like domain-containing protein.
      
 0.530
evm_005353
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
      
 0.510
evm_006983
Uncharacterized protein.
      
 0.491
evm_012085
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.489
evm_008644
Autophagy-related protein 3.
      
 0.487
evm_001750
Rad60-SLD domain-containing protein.
      
 0.457
evm_002720
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
      
 0.452
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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