STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_009498PX domain-containing protein. (419 aa)    
Predicted Functional Partners:
evm_012267
PX domain-containing protein.
    
0.997
evm_006080
Uncharacterized protein.
    
 0.973
evm_000893
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.951
evm_009797
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.942
evm_001959
V-SNARE coiled-coil homology domain-containing protein.
    
 0.796
evm_001947
V-SNARE coiled-coil homology domain-containing protein.
    
 0.796
evm_008829
VWFA domain-containing protein.
   
 
 0.788
evm_010395
Uncharacterized protein.
   
 
 0.788
evm_013461
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.767
evm_015122
Uncharacterized protein.
   
 
 0.767
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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