STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_008678Uncharacterized protein; Belongs to the peptidase C1 family. (545 aa)    
Predicted Functional Partners:
evm_011701
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.727
evm_000746
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.727
evm_014972
A1_Propeptide domain-containing protein.
   
 0.727
evm_006496
CARD domain-containing protein.
   
 0.673
evm_001424
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.655
evm_006669
Uncharacterized protein.
   
 0.634
evm_006670
Uncharacterized protein.
   
 0.634
evm_006638
Uncharacterized protein.
   
 
 0.618
evm_001352
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.592
evm_001340
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.566
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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