evm_006695 protein (Chilo suppressalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

evm_006695

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (278 aa)

Predicted Functional Partners:

evm_004709

0.919

evm_004660

0.845

evm_012286

0.839

evm_009656

0.838

evm_010438

0.833

evm_004606

0.832

evm_010428

0.817

evm_004972

0.799

evm_013304

0.796

evm_011894

0.788

Your Current Organism:

Chilo suppressalis

NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
evm_004606	evm_004709	A0A3S2LCK3	A0A3S2NWJ1	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.987
evm_004606	evm_004972	A0A3S2LCK3	A0A437BJK0	Peroxisomal membrane protein PEX16.	zf-Tim10_DDP domain-containing protein.	0.902
evm_004606	evm_006695	A0A3S2LCK3	A0A437BDY9	Peroxisomal membrane protein PEX16.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.832
evm_004606	evm_009656	A0A3S2LCK3	A0A437B594	Peroxisomal membrane protein PEX16.	SH3 domain-containing protein.	0.848
evm_004606	evm_010428	A0A3S2LCK3	A0A3S2N9A1	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.792
evm_004606	evm_010438	A0A3S2LCK3	A0A437B313	Peroxisomal membrane protein PEX16.	Uncharacterized protein.	0.859
evm_004606	evm_012286	A0A3S2LCK3	A0A3S2N6Z7	Peroxisomal membrane protein PEX16.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.850
evm_004660	evm_006695	A0A437BJY2	A0A437BDY9	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.845
evm_004660	evm_011894	A0A437BJY2	A0A3S2NMG2	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	Amidohydro-rel domain-containing protein.	0.410
evm_004709	evm_004606	A0A3S2NWJ1	A0A3S2LCK3	Uncharacterized protein.	Peroxisomal membrane protein PEX16.	0.987
evm_004709	evm_004972	A0A3S2NWJ1	A0A437BJK0	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein.	0.998
evm_004709	evm_006695	A0A3S2NWJ1	A0A437BDY9	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.919
evm_004709	evm_009656	A0A3S2NWJ1	A0A437B594	Uncharacterized protein.	SH3 domain-containing protein.	0.998
evm_004709	evm_010428	A0A3S2NWJ1	A0A3S2N9A1	Uncharacterized protein.	Uncharacterized protein.	0.922
evm_004709	evm_010438	A0A3S2NWJ1	A0A437B313	Uncharacterized protein.	Uncharacterized protein.	0.993
evm_004709	evm_012286	A0A3S2NWJ1	A0A3S2N6Z7	Uncharacterized protein.	Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.	0.988
evm_004972	evm_004606	A0A437BJK0	A0A3S2LCK3	zf-Tim10_DDP domain-containing protein.	Peroxisomal membrane protein PEX16.	0.902
evm_004972	evm_004709	A0A437BJK0	A0A3S2NWJ1	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein.	0.998
evm_004972	evm_006695	A0A437BJK0	A0A437BDY9	zf-Tim10_DDP domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.799
evm_004972	evm_009656	A0A437BJK0	A0A437B594	zf-Tim10_DDP domain-containing protein.	SH3 domain-containing protein.	0.951