evm_004323 protein (Chilo suppressalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

evm_004323

Uncharacterized protein. (643 aa)

Predicted Functional Partners:

evm_006080

0.978

evm_007467

0.897

evm_007497

0.819

evm_013107

0.804

evm_009546

0.799

evm_000367

0.786

evm_000327

0.781

evm_000851

0.759

evm_004657

0.754

evm_003046

0.745

Your Current Organism:

Chilo suppressalis

NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
evm_000327	evm_004323	A0A3S2LW17	A0A437BKN2	Uncharacterized protein.	Uncharacterized protein.	0.781
evm_000327	evm_004657	A0A3S2LW17	A0A437BJV5	Uncharacterized protein.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.902
evm_000327	evm_007467	A0A3S2LW17	A0A3S2NCW6	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.587
evm_000327	evm_007497	A0A3S2LW17	A0A3S2LZV9	Uncharacterized protein.	PMSR domain-containing protein.	0.597
evm_000327	evm_009546	A0A3S2LW17	A0A437B5M1	Uncharacterized protein.	Uncharacterized protein.	0.842
evm_000367	evm_000851	A0A3S2P8J9	A0A3S2M9V9	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.442
evm_000367	evm_003046	A0A3S2P8J9	A0A3S2M6S4	Uncharacterized protein.	Uncharacterized protein.	0.639
evm_000367	evm_004323	A0A3S2P8J9	A0A437BKN2	Uncharacterized protein.	Uncharacterized protein.	0.786
evm_000367	evm_013107	A0A3S2P8J9	A0A3S2LQF1	Uncharacterized protein.	Calreticulin.	0.498
evm_000851	evm_000367	A0A3S2M9V9	A0A3S2P8J9	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.442
evm_000851	evm_004323	A0A3S2M9V9	A0A437BKN2	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.759
evm_000851	evm_004657	A0A3S2M9V9	A0A437BJV5	Dihydrolipoyl dehydrogenase.	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	0.902
evm_000851	evm_007467	A0A3S2M9V9	A0A3S2NCW6	Dihydrolipoyl dehydrogenase.	Cytochrome b5 heme-binding domain-containing protein.	0.587
evm_000851	evm_007497	A0A3S2M9V9	A0A3S2LZV9	Dihydrolipoyl dehydrogenase.	PMSR domain-containing protein.	0.597
evm_000851	evm_009546	A0A3S2M9V9	A0A437B5M1	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.851
evm_003046	evm_000367	A0A3S2M6S4	A0A3S2P8J9	Uncharacterized protein.	Uncharacterized protein.	0.639
evm_003046	evm_004323	A0A3S2M6S4	A0A437BKN2	Uncharacterized protein.	Uncharacterized protein.	0.745
evm_003046	evm_013107	A0A3S2M6S4	A0A3S2LQF1	Uncharacterized protein.	Calreticulin.	0.986
evm_004323	evm_000327	A0A437BKN2	A0A3S2LW17	Uncharacterized protein.	Uncharacterized protein.	0.781
evm_004323	evm_000367	A0A437BKN2	A0A3S2P8J9	Uncharacterized protein.	Uncharacterized protein.	0.786