STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_003784Fam20C domain-containing protein. (569 aa)    
Predicted Functional Partners:
evm_005248
Uncharacterized protein.
     
 0.710
evm_000632
Uncharacterized protein.
   
 
  0.688
evm_001189
Uncharacterized protein.
    
  0.686
evm_012532
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
  0.682
evm_002671
Uncharacterized protein.
     
 0.677
evm_004689
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
  0.667
evm_004001
Fork-head domain-containing protein.
    
 0.665
evm_012593
Fork-head domain-containing protein.
    
  0.661
evm_009480
Fork-head domain-containing protein.
    
  0.661
evm_005795
Uncharacterized protein.
    
  0.661
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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