STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evm_000979Beta-Casp domain-containing protein. (662 aa)    
Predicted Functional Partners:
evm_008747
Uncharacterized protein.
   
 0.999
evm_001128
Uncharacterized protein.
    
 0.998
evm_015089
Uncharacterized protein.
   
 0.992
evm_012578
Uncharacterized protein.
   
 0.992
evm_013267
Uncharacterized protein.
   
 0.979
evm_000091
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
  0.970
evm_005337
Uncharacterized protein.
    
 0.952
evm_000664
Uncharacterized protein.
    
 0.948
evm_010704
Uncharacterized protein.
    
 0.948
evm_014780
Uncharacterized protein.
    
 0.948
Your Current Organism:
Chilo suppressalis
NCBI taxonomy Id: 168631
Other names: Asiatic rice borer, C. suppressalis, Crambus suppressalis, striped rice borer, striped riceborer
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