STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0052Beta-glucosidase. (995 aa)    
Predicted Functional Partners:
BCOR_0424
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
  0.914
BCOR_0155
Alpha-glucosidase.
     
 0.905
BCOR_1214
Putative alpha-L-rhamnosidase.
    
  0.902
BCOR_0050
Hypothetical protein.
 
   
 0.872
BCOR_0051
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
 
  
 
0.842
BCOR_0048
Two-component sensor histidine kinase.
  
     0.768
BCOR_0910
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.752
BCOR_0396
Beta-glucosidase.
  
  
 
0.735
BCOR_0165
Beta-glucosidase, cellodextrinase, glycosyl hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.673
BCOR_0047
Two-component response regulator VirR.
  
     0.636
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.