Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BCOR_0053alpha-L-arabinofuranosidase. (517 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.864
uxaC
Glucuronate isomerase.
   
 
 0.821
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
  0.803
BCOR_0054
Extracellular solute-binding protein.
 
    0.685
BCOR_0171
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.556
BCOR_0179
Family 43 glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.442
BCOR_0055
ABC transporter inner membrane protein.
  
    0.439
BCOR_1040
Beta-galactosidase.
 
  
 0.424
BCOR_0056
ABC superfamily ATP binding cassette transporter, membrane protein.
  
    0.421
BCOR_0395
Beta-galactosidase.
 
  
 0.404
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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