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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0067ABC transporter, ATP-binding protein. (486 aa)    
Predicted Functional Partners:
BCOR_0068
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
   0.984
BCOR_0069
Putative membrane protein.
 
    0.954
BCOR_0897
Cobalt transport protein.
 
  
0.721
BCOR_0918
ABC transporter.
 
  
0.657
BCOR_0065
Efflux ABC transporter, permease protein.
  
    0.484
BCOR_0066
ABC transporter, ATP-binding protein.
  
   
0.480
BCOR_0850
Multidrug ABC transporter ATPase and permease.
    
0.477
BCOR_0898
ABC-type cobalt transport system, permease protein.
 
    0.442
msrA
Peptide methionine sulfoxide reductase MsrA/MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 
 0.428
BCOR_1073
Permease protein of ABC transporter system.
 
    0.400
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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