STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0068ABC-type cobalt transport system, permease component CbiQ and related transporters. (229 aa)    
Predicted Functional Partners:
BCOR_0067
ABC transporter, ATP-binding protein.
 
   0.981
BCOR_0069
Putative membrane protein.
 
     0.953
BCOR_0850
Multidrug ABC transporter ATPase and permease.
 
     0.755
BCOR_0849
ABC-type multidrug transport system, ATPase and permease components.
 
     0.739
BCOR_0918
ABC transporter.
 
   0.633
BCOR_0514
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
  
   0.516
BCOR_1034
ATP-binding protein of ABC transporter system for peptides.
  
   0.516
BCOR_1035
ATP-binding protein of ABC transporter system for peptides.
  
   0.516
BCOR_0065
Efflux ABC transporter, permease protein.
       0.476
BCOR_0066
ABC transporter, ATP-binding protein.
       0.476
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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