STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0081TrxB Thioredoxin reductase/Thioredoxin/glutaredoxin family protein. (581 aa)    
Predicted Functional Partners:
BCOR_0080
AhpC Alkyl hydroperoxide reductase C22 protein.
 
 
 0.997
BCOR_0029
Thioredoxin-disulfide reductase.
 
 
0.928
BCOR_0756
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.910
BCOR_0323
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.822
BCOR_1261
Thioredoxin-like protein.
  
 
 0.822
BCOR_0077
Hypothetical protein; Belongs to the Dps family.
  
  
 0.800
msrA
Peptide methionine sulfoxide reductase MsrA/MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.701
BCOR_1269
Glutaredoxin nrdH.
  
 
 0.685
BCOR_0901
Dihydrolipoamide dehydrogenase.
  
 
 0.653
BCOR_0709
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.646
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.