STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0096Cell division protein; Belongs to the SEDS family. (499 aa)    
Predicted Functional Partners:
BCOR_0095
Penicillin binding protein transpeptidase domain protein.
 
 0.999
BCOR_0461
Cell division protein ftsW; Belongs to the SEDS family.
  
  
0.932
BCOR_0093
Serine-threonine protein kinase.
 
 
 0.921
BCOR_0456
Peptidoglycan synthetase FtsI, penicillin-binding protein.
 
 
 0.916
BCOR_0464
Cell division protein ftsQ.
 
 
 0.914
BCOR_0098
FHA domain protein.
 
   
 0.897
BCOR_0094
Serine/threonine protein kinase.
 
 
 0.893
BCOR_0097
Pp2c Protein phosphatase 2C.
 
  
 0.891
BCOR_0099
FHA domain protein.
 
   
 0.855
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.756
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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