Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0130Oligo-1,6-glucosidase. (636 aa)    
Predicted Functional Partners:
BCOR_0155
Alpha-glucosidase.
 
  
 
0.933
BCOR_0424
Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.924
BCOR_0125
Alpha-galactosidase.
  
 
 0.913
BCOR_0138
Alpha-galactosidase.
  
 
 0.913
BCOR_1184
Amino acid permease.
   
 0.733
BCOR_0131
Trehalose-phosphatase.
  
  
 0.721
BCOR_0170
Glycosyl hydrolase.
 
  
 0.614
BCOR_0735
Glutamate synthase large chain GltB.
     
 0.533
BCOR_0128
Raffinose transport system permease protein.
  
    0.529
BCOR_0129
Sugar ABC transporter permease.
  
    0.508
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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