STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0131Trehalose-phosphatase. (816 aa)    
Predicted Functional Partners:
BCOR_0170
Glycosyl hydrolase.
  
 0.975
BCOR_0644
UTP-glucose-1-phosphate uridylyltransferase.
   
 
 0.913
BCOR_1029
OsmC family protein.
   
    0.743
BCOR_0130
Oligo-1,6-glucosidase.
  
  
 0.721
BCOR_0132
Threonine dehydratase.
  
    0.636
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.636
BCOR_0077
Hypothetical protein; Belongs to the Dps family.
   
  
 0.632
BCOR_0310
2,5-diketo-D-gluconate reductase.
   
 
 0.632
BCOR_0524
Aldo/keto reductase family.
   
 
 0.632
BCOR_0693
Transketolase; Belongs to the transketolase family.
   
  
 0.622
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.