STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0135Sugar-binding protein of ABC transporter system. (295 aa)    
Predicted Functional Partners:
BCOR_0136
Sugar ABC transporter permease.
 
  0.995
BCOR_0014
ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.975
BCOR_0178
Binding-protein-dependent transport systems inner membrane component.
 
  0.972
BCOR_0129
Sugar ABC transporter permease.
 
  0.950
BCOR_0361
Binding-protein-dependent transport systems inner membrane component.
 
  0.950
BCOR_1100
Sugar ABC transporter permease.
 
  0.947
BCOR_0874
Putative sugar ABC transporter, permease protein.
 
  0.938
BCOR_0134
Sugar ABC transporter substrate-binding protein.
 
   0.914
BCOR_1216
ABC transporter, permease protein.
 
   0.862
BCOR_0056
ABC superfamily ATP binding cassette transporter, membrane protein.
 
   0.856
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.