STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0142Chromate reductase/NADPH-dependent FMN reductase/Oxygen-insensitive NADPH nitroreductase; Belongs to the flavin oxidoreductase frp family. (281 aa)    
Predicted Functional Partners:
BCOR_1136
Riboflavin kinase/FMN adenylyltransferase.
    
 0.909
BCOR_0143
Hypothetical protein.
       0.622
BCOR_0144
Phosphoglycerate mutase family protein.
  
    0.555
BCOR_1369
ABC-2 type transporter.
  
    0.539
BCOR_0735
Glutamate synthase large chain GltB.
     
 0.505
BCOR_1381
Glyoxalase family protein.
  
    0.451
tadA
Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.422
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.