STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0154Permease protein of ABC transporter system for sugars. (278 aa)    
Predicted Functional Partners:
BCOR_0152
Solute-binding protein ABC transporter (MalE family).
 
  0.993
BCOR_0153
Permease protein of ABC transporter system for sugars.
 
   0.969
BCOR_0148
Permease protein of ABC transporter system for sugars.
 
  
 
0.915
BCOR_0147
Permease protein of ABC transporter system for sugars.
 
   0.891
BCOR_0145
Solute binding protein of ABC transporter system for sugars.
 
   0.872
BCOR_0014
ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.701
BCOR_0128
Raffinose transport system permease protein.
 
   0.640
BCOR_0177
Binding-protein-dependent transporter inner membrane component.
 
   0.625
BCOR_1101
Sugar ABC transporter permease.
 
   0.622
BCOR_0135
Sugar-binding protein of ABC transporter system.
 
   0.615
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.