STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0208GntR family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
BCOR_0210
Sugar isomerase (SIS).
 
  
 0.795
BCOR_0209
Carbohydrate kinase, PfkB.
 
     0.767
BCOR_0207
Amidohydrolase family protein.
 
     0.644
BCOR_0206
C4-dicarboxylate anaerobic carrier.
 
     0.517
BCOR_1024
Putative transcriptional regulator.
   
  
 0.479
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.453
BCOR_0170
Glycosyl hydrolase.
  
  
 0.443
BCOR_0811
Cell envelope-related transcriptional attenuator.
   
    0.443
BCOR_0528
Transcriptional regulator, MerR family.
   
  
 0.441
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.