STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0249CydD, cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component. (608 aa)    
Predicted Functional Partners:
BCOR_0248
ATP-binding cassette, subfamily C, bacterial CydD; CydC, cytochrome D ABC superfamily ATP binding cassette transporter, ATP-binding and permease protein.
 
0.999
BCOR_0247
CydB, cytochrome D ubiquinol oxidase subunit II.
 
  
 0.985
BCOR_0246
CydA, cytochrome D ubiquinol oxidase subunit I.
 
  
 0.976
BCOR_0245
NADH dehydrogenase, FAD-containing subunit.
 
   
 0.869
BCOR_0250
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
     0.652
metN
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.532
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.