Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BCOR_0327Putative ErfK/YbiS/YcfS/YnhG superfamily protein. (549 aa)    
Predicted Functional Partners:
BCOR_0325
Hydrolase.
       0.631
BCOR_0326
Phosphohydrolase.
       0.630
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.588
BCOR_0329
Hypothetical protein.
 
     0.587
BCOR_0335
Penicillin-binding protein Pbp.
 
   
 0.548
BCOR_0324
Hypothetical protein.
       0.523
BCOR_1235
Hypothetical protein.
  
     0.499
BCOR_1209
FHA domain protein.
  
     0.454
BCOR_0219
1,4-beta-N-acetylmuramidase.
  
     0.441
BCOR_0432
DivIVA domain protein.
  
    0.433
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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