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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0338DeoR family transcriptional regulator. (278 aa)    
Predicted Functional Partners:
BCOR_0339
Galactose-1-phosphate uridylyltransferase.
 
     0.792
BCOR_0340
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
   
 0.684
BCOR_0337
Glycosyltransferase.
  
    0.649
BCOR_0341
ACT domain protein; Belongs to the UPF0237 family.
       0.545
BCOR_0200
Short-chain alcohol dehydrogenase.
  
    0.478
BCOR_1070
Acetoin dehydrogenase.
  
    0.478
BCOR_0342
Hypothetical protein.
  
    0.474
BCOR_0197
MIP family glycerol uptake facilitator protein GlpF; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.463
BCOR_1295
Acetyltransferase (GNAT) family.
  
 
   0.463
BCOR_0336
NADH-dependent flavin oxidoreductase BaiC.
       0.449
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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