Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCOR_0517tRNA (Uracil-5-) -methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (425 aa)    
Predicted Functional Partners:
BCOR_0515
Hypothetical protein.
       0.747
BCOR_0516
Hypothetical protein.
       0.747
BCOR_0514
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
       0.633
BCOR_0513
Oligopeptide transport system permease protein oppC.
       0.629
BCOR_0518
Cation-transporting ATPase.
       0.623
BCOR_0519
Cation-transporting ATPase.
       0.618
BCOR_0583
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
  
 0.600
BCOR_0512
Oligopeptide transport system permease protein oppB.
       0.586
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
  
 0.569
rsmI
Uroporphyrin-III C/tetrapyrrole; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
  
 0.545
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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