sigA protein (Bifidobacterium coryneforme) - STRING interaction network

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sigA

RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (531 aa)

Predicted Functional Partners:

rpoB

0.977

rpoA

0.968

rpoC

0.964

rbpA

0.950

rpoZ

0.950

BCOR_0799

0.941

BCOR_0334

0.870

whiA

0.859

BCOR_0643

0.852

BCOR_0452

0.846

Your Current Organism:

Bifidobacterium coryneforme

NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCOR_0334	rpoA	BCOR_0334	BCOR_1144	Transcription regulator, crp family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.855
BCOR_0334	rpoB	BCOR_0334	BCOR_0346	Transcription regulator, crp family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.868
BCOR_0334	rpoC	BCOR_0334	BCOR_0347	Transcription regulator, crp family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.856
BCOR_0334	rpoZ	BCOR_0334	BCOR_0950	Transcription regulator, crp family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.842
BCOR_0334	sigA	BCOR_0334	BCOR_0546	Transcription regulator, crp family.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.870
BCOR_0452	rbpA	BCOR_0452	BCOR_0640	ATP-dependent DNA helicase.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.758
BCOR_0452	rpoA	BCOR_0452	BCOR_1144	ATP-dependent DNA helicase.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.790
BCOR_0452	rpoB	BCOR_0452	BCOR_0346	ATP-dependent DNA helicase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.869
BCOR_0452	rpoC	BCOR_0452	BCOR_0347	ATP-dependent DNA helicase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.864
BCOR_0452	rpoZ	BCOR_0452	BCOR_0950	ATP-dependent DNA helicase.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.822
BCOR_0452	sigA	BCOR_0452	BCOR_0546	ATP-dependent DNA helicase.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.846
BCOR_0643	rbpA	BCOR_0643	BCOR_0640	Hypothetical protein.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.769
BCOR_0643	rpoA	BCOR_0643	BCOR_1144	Hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.843
BCOR_0643	rpoB	BCOR_0643	BCOR_0346	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.858
BCOR_0643	rpoC	BCOR_0643	BCOR_0347	Hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.843
BCOR_0643	rpoZ	BCOR_0643	BCOR_0950	Hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.791
BCOR_0643	sigA	BCOR_0643	BCOR_0546	Hypothetical protein.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.852
BCOR_0799	rbpA	BCOR_0799	BCOR_0640	CarD family transcriptional regulator.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.958
BCOR_0799	rpoA	BCOR_0799	BCOR_1144	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
BCOR_0799	rpoB	BCOR_0799	BCOR_0346	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.942

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