sigA protein (Bifidobacterium coryneforme) - STRING interaction network

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sigA

RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (531 aa)

Predicted Functional Partners:

rpoB

0.999

rpoC

0.999

rbpA

0.999

BCOR_0799

0.999

rpoZ

0.999

rpoA

0.999

whiB-2

0.896

BCOR_1018

0.805

BCOR_0547

0.777

dnaG

0.772

Your Current Organism:

Bifidobacterium coryneforme

NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BCOR_0547	rpoB	BCOR_0547	BCOR_0346	DNA gyrase subunit B.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.682
BCOR_0547	sigA	BCOR_0547	BCOR_0546	DNA gyrase subunit B.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.777
BCOR_0799	rbpA	BCOR_0799	BCOR_0640	CarD family transcriptional regulator.	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.999
BCOR_0799	rpoA	BCOR_0799	BCOR_1144	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCOR_0799	rpoB	BCOR_0799	BCOR_0346	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCOR_0799	rpoC	BCOR_0799	BCOR_0347	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCOR_0799	rpoZ	BCOR_0799	BCOR_0950	CarD family transcriptional regulator.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
BCOR_0799	sigA	BCOR_0799	BCOR_0546	CarD family transcriptional regulator.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.999
BCOR_1018	rpoA	BCOR_1018	BCOR_1144	Ferric uptake regulation protein; Belongs to the Fur family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
BCOR_1018	rpoB	BCOR_1018	BCOR_0346	Ferric uptake regulation protein; Belongs to the Fur family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.749
BCOR_1018	rpoC	BCOR_1018	BCOR_0347	Ferric uptake regulation protein; Belongs to the Fur family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.747
BCOR_1018	rpoZ	BCOR_1018	BCOR_0950	Ferric uptake regulation protein; Belongs to the Fur family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.744
BCOR_1018	sigA	BCOR_1018	BCOR_0546	Ferric uptake regulation protein; Belongs to the Fur family.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.805
dnaG	rpoA	BCOR_1027	BCOR_1144	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.416
dnaG	rpoB	BCOR_1027	BCOR_0346	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.717
dnaG	rpoC	BCOR_1027	BCOR_0347	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.805
dnaG	sigA	BCOR_1027	BCOR_0546	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.772
rbpA	BCOR_0799	BCOR_0640	BCOR_0799	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	CarD family transcriptional regulator.	0.999
rbpA	rpoA	BCOR_0640	BCOR_1144	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rbpA	rpoB	BCOR_0640	BCOR_0346	Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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