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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0550Hypothetical protein. (424 aa)    
Predicted Functional Partners:
BCOR_0551
Hypothetical protein.
 
     0.806
BCOR_0939
Hypothetical protein.
  
    0.761
BCOR_1225
Hypothetical protein.
  
     0.752
BCOR_0322
G5 domain protein.
  
     0.731
BCOR_0806
Hypothetical protein.
  
     0.725
BCOR_1302
Hypothetical protein.
  
    0.720
BCOR_0018
G5 domain-containing protein.
 
    0.716
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.702
BCOR_0808
Hypothetical protein.
  
 
 
 0.701
BCOR_1263
Hypothetical protein.
  
     0.700
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.