Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCOR_0558Glutamate-binding protein gluB; Belongs to the bacterial solute-binding protein 3 family. (279 aa)    
Predicted Functional Partners:
BCOR_0559
Glutamate transport system permease protein GluC.
 
 0.996
BCOR_0560
Glutamate transport system permease protein gluD.
 
 0.994
BCOR_0557
Glutamate transport ATP-binding protein gluA.
 
 0.985
BCOR_0600
Glutamate-binding protein GluB; Belongs to the bacterial solute-binding protein 3 family.
  
  
 
0.907
BCOR_0561
DEAD box-like helicase.
       0.640
BCOR_0562
Glutamate transport ATP-binding protein.
 
 
 0.552
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.545
BCOR_1266
Glutamine transport ATP-binding protein glnQ.
 
 
 0.508
BCOR_1268
Glutamine transporter permease.
 
   0.495
BCOR_0555
histidyl-tRNA synthetase.
       0.483
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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