Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCOR_0603ComE operon protein 3. (559 aa)    
Predicted Functional Partners:
tsaD
O-sialoglycoprotein endopeptidase Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
    0.790
BCOR_0604
DNA polymerase III, delta subunit.
 
   
 0.789
BCOR_0605
Hypothetical protein.
       0.752
BCOR_0606
Glycoprotease protein family.
       0.752
BCOR_0607
Acetyltransferase.
       0.752
BCOR_0602
ComE operon protein 1.
  
  
 0.706
BCOR_0804
Phosphoribosylpyrophosphate transferase domain protein.
 
  
 0.699
BCOR_0841
Magnesium chelatase subunit ChlI-like ATPase.
 
  
 0.607
BCOR_0842
DNA protecting protein DprA.
 
  
 0.606
BCOR_0840
Hypothetical protein; Belongs to the UPF0102 family.
  
    0.568
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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