Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0650Hypothetical protein. (252 aa)    
Predicted Functional Partners:
BCOR_0651
ATP-binding protein of ABC transporter system.
  
   0.837
BCOR_0649
Putative membrane spanning protein.
       0.825
BCOR_0652
Hypothetical protein.
     
 0.610
BCOR_0647
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.572
BCOR_0648
Hypothetical protein.
       0.535
BCOR_0495
Multidrug ABC transporter ATPase.
  
   0.463
BCOR_0660
ABC transporter ATP-binding protein.
  
   0.463
BCOR_1299
Hypothetical protein.
  
   0.463
BCOR_1300
ATP-binding protein of ABC transporter system.
  
   0.463
BCOR_1370
ABC transporter.
  
   0.463
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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