STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0660ABC transporter ATP-binding protein. (323 aa)    
Predicted Functional Partners:
BCOR_0658
Putative membrane protein.
  
    0.809
BCOR_0659
Putative membrane protein.
  
    0.809
BCOR_0060
ABC transporter ATP-binding protein.
 
    
0.549
BCOR_0496
Lantibiotic protection ABC transporter, permease subunit, MutE/EpiE family.
 
    0.479
BCOR_0650
Hypothetical protein.
  
   0.463
BCOR_0191
ABC-type sugar transport system.
  
     0.458
BCOR_1369
ABC-2 type transporter.
  
  
 0.437
BCOR_0731
ABC transporter, permease/ATP-binding protein.
  
  0.404
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.