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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0841Magnesium chelatase subunit ChlI-like ATPase. (524 aa)    
Predicted Functional Partners:
BCOR_0842
DNA protecting protein DprA.
 
 0.966
BCOR_0840
Hypothetical protein; Belongs to the UPF0102 family.
 
  
 0.959
BCOR_0839
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
       0.663
BCOR_0603
ComE operon protein 3.
 
  
 0.596
ruvC
Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
  
   
 0.472
BCOR_0843
Succinate dehydrogenase flavoprotein subunit.
     
 0.431
BCOR_0804
Phosphoribosylpyrophosphate transferase domain protein.
 
  
 0.416
BCOR_0838
O-acetylhomoserine aminocarboxypropyltransferase.
       0.408
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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