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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0874Putative sugar ABC transporter, permease protein. (285 aa)    
Predicted Functional Partners:
BCOR_0875
Sugar-binding protein of ABC transporter system.
   0.975
BCOR_0014
ATP binding protein of ABC transporter; Belongs to the ABC transporter superfamily.
 
 0.964
BCOR_0362
ABC transporter membrane component.
   0.881
BCOR_0876
Sugars ABC transporter substrate-binding protein.
 
     0.875
BCOR_0055
ABC transporter inner membrane protein.
 
   0.870
BCOR_1217
ABC transporter, permease protein.
 
 0.861
BCOR_0873
AglL Glycosyl hydrolases family 31, Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
    0.849
BCOR_0177
Binding-protein-dependent transporter inner membrane component.
   0.836
BCOR_0363
Putative solute-binding lipoprotein.
 
     0.768
BCOR_0135
Sugar-binding protein of ABC transporter system.
 
 
 0.741
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.