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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0897Cobalt transport protein. (868 aa)    
Predicted Functional Partners:
BCOR_0898
ABC-type cobalt transport system, permease protein.
 
  
 0.973
BCOR_1073
Permease protein of ABC transporter system.
 
  
 0.846
BCOR_0067
ABC transporter, ATP-binding protein.
 
  
0.721
BCOR_0918
ABC transporter.
 
  
0.709
BCOR_1035
ATP-binding protein of ABC transporter system for peptides.
 
  
0.618
BCOR_0514
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 
  
0.616
BCOR_1034
ATP-binding protein of ABC transporter system for peptides.
  
  
0.576
BCOR_0899
Peptidase family M20A protein.
  
    0.550
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.470
BCOR_0900
Hypothetical protein.
       0.436
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.