Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCOR_0918ABC transporter. (834 aa)    
Predicted Functional Partners:
BCOR_0917
Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
 
   
 0.782
BCOR_1036
Solute-binding protein of ABC transporter system for peptides.
 
 
 0.736
BCOR_1037
Solute-binding protein of ABC transporter system for peptides.
 
 
 0.736
BCOR_0512
Oligopeptide transport system permease protein oppB.
 
 
 0.697
BCOR_0916
Glycosyltransferase.
 
     0.693
BCOR_0513
Oligopeptide transport system permease protein oppC.
 
 
 0.684
BCOR_0898
ABC-type cobalt transport system, permease protein.
 
  
 0.670
BCOR_1073
Permease protein of ABC transporter system.
 
  
 0.670
BCOR_0897
Cobalt transport protein.
 
  
0.664
BCOR_0068
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
   0.633
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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