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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0918ABC transporter. (834 aa)    
Predicted Functional Partners:
BCOR_0917
Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
 
   
 0.804
BCOR_0916
Glycosyltransferase.
 
     0.710
BCOR_0897
Cobalt transport protein.
 
  
0.709
BCOR_0898
ABC-type cobalt transport system, permease protein.
 
  
 0.690
BCOR_0068
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
   0.685
BCOR_1073
Permease protein of ABC transporter system.
 
  
 0.684
BCOR_1035
ATP-binding protein of ABC transporter system for peptides.
 
  
0.670
BCOR_1034
ATP-binding protein of ABC transporter system for peptides.
 
  
0.665
BCOR_0067
ABC transporter, ATP-binding protein.
 
  
0.657
BCOR_1037
Solute-binding protein of ABC transporter system for peptides.
 
  
 0.634
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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