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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_0942Hypothetical protein; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family. (65 aa)    
Predicted Functional Partners:
BCOR_0941
Proteasome accessory factor PafA.
 
     0.889
BCOR_0943
Inositol monophosphatase family protein.
 
     0.768
BCOR_0944
Proteasome accessory factor PafA2.
 
     0.744
BCOR_0945
AAA family ATPase.
 
     0.654
BCOR_1342
Hypothetical protein.
  
     0.591
BCOR_0535
Hypothetical protein.
  
     0.526
BCOR_0023
Phosphohydrolase; Belongs to the Nudix hydrolase family.
  
     0.473
BCOR_0354
Putative ATP-dependent DNA helicase, UvrD/REP family.
  
     0.454
BCOR_0410
Hypothetical protein.
  
     0.434
BCOR_0549
Type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.433
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.