STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_1043ABC transporter ATP-binding protein. (270 aa)    
Predicted Functional Partners:
BCOR_1044
Permease protein of ABC transporter system.
  0.997
BCOR_0563
Permease protein of ABC transporter system.
 
 0.868
BCOR_1045
Solute binding protein of ABC transporter system.
 
   0.866
BCOR_0559
Glutamate transport system permease protein GluC.
 
 
 0.861
BCOR_0560
Glutamate transport system permease protein gluD.
 
 
 0.857
BCOR_1268
Glutamine transporter permease.
 
   0.831
BCOR_1134
Putative Glutamate transport ATP-binding protein gluA.
   0.763
BCOR_1267
Glutamine transporter permease.
 
   0.747
glmS
Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
    0.645
BCOR_1041
Ribosomal large subunit pseudouridine synthase D.
       0.638
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.