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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCOR_1093Universal stress family protein. (351 aa)    
Predicted Functional Partners:
BCOR_1095
CHAP domain.
 
    0.687
BCOR_1315
Pre-pilin peptidase or phosphoesterase.
 
   
 0.640
BCOR_1076
Hypothetical protein.
  
     0.586
BCOR_1263
Hypothetical protein.
  
     0.574
BCOR_1127
Hypothetical protein.
  
     0.536
BCOR_1048
CHAP domain containing protein.
  
     0.530
BCOR_0439
Hypothetical protein.
  
     0.528
BCOR_1336
Pilus assembly protein, probably tadC.
  
     0.524
BCOR_0807
Hypothetical protein.
  
     0.521
hpf
Ribosome-associated factor Y; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.498
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.