Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BCOR_1112Putative phage shock protein C, PspC. (641 aa)    
Predicted Functional Partners:
BCOR_1111
Hypothetical protein.
       0.801
BCOR_1113
Histidine kinase sensor of two component system.
 
    0.793
BCOR_1114
Response regulator of two-component system.
 
  
 0.742
BCOR_0351
Fibronectin type III domain-containing protein.
  
     0.559
BCOR_1208
DNA and RNA helicase-like protein.
  
     0.557
BCOR_0113
Trypsin-like serine protease.
 
  
 0.553
BCOR_1077
Dihydroneopterin aldolase fused to 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
 
     0.542
BCOR_1315
Pre-pilin peptidase or phosphoesterase.
  
    0.532
BCOR_0439
Hypothetical protein.
  
     0.513
BCOR_0411
Aminoglycoside phosphotransferase.
  
     0.509
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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