Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BCOR_1113Histidine kinase sensor of two component system. (407 aa)    
Predicted Functional Partners:
BCOR_1114
Response regulator of two-component system.
 
 
 0.979
BCOR_1112
Putative phage shock protein C, PspC.
 
    0.793
BCOR_0656
Two-component response regulator.
 
 
 0.750
BCOR_0113
Trypsin-like serine protease.
  
  
 0.619
BCOR_0499
Sensor histidine kinase.
   
 
 0.584
BCOR_0801
Sensory transduction protein kinase.
   
 
 0.584
BCOR_0236
Major facilitator superfamily protein.
  
     0.550
BCOR_0534
Transcriptional regulator.
  
  
 0.541
BCOR_1367
Putative ABC transporter, permease protein.
 
   0.537
BCOR_1110
Hydrolase of the alpha/beta superfamily.
 
    0.501
Your Current Organism:
Bifidobacterium coryneforme
NCBI taxonomy Id: 1687
Other names: AS 1.2279, ATCC 25911, B. coryneforme, BCRC 14675, Bifidobacterium sp. Bma6, CCRC 14675, CCRC:14675, CCUG 34986, DSM 20216, JCM 5819, LMG 18911, LMG:18911
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